IL_7PZY_203

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

7PZY|1|A|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_203 not in the Motif Atlas

Geometric match to IL_5J7L_039

Geometric discrepancy: 0.0712

The information below is about IL_5J7L_039

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7PZY|1|A|G|1131
7PZY|1|A|A|1132
*
7PZY|1|A|U|1617
7PZY|1|A|A|1618
7PZY|1|A|C|1619

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain D

Ribosomal 40S subunit protein S2

Chain b

40S ribosomal protein S26

Chain i

HABP4_PAI-RBP1 domain-containing protein