IL_7PZY_208
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- GUC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_208 not in the Motif Atlas
- Geometric match to IL_3SZX_003
- Geometric discrepancy: 0.1144
- The information below is about IL_3SZX_003
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 213
Unit IDs
7PZY|1|A|G|1198
7PZY|1|A|U|1199
7PZY|1|A|C|1200
*
7PZY|1|A|G|1434
7PZY|1|A|U|1435
7PZY|1|A|U|1436
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal 40S subunit protein S10A
- Chain Q
- Ribosomal 40S subunit protein S15
- Chain e
- Ribosomal 40S subunit protein S29A
- Chain g
- Ubiquitin-ribosomal 40S subunit protein S31 fusion protein
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