IL_7PZY_246

3D structure

PDB id

7PZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the vacant Candida albicans 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

GG*UUUC

Length

6 nucleotides

Bulged bases

7PZY|1|1|U|1816, 7PZY|1|1|U|1817

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PZY_246 not in the Motif Atlas

Homologous match to IL_8CRE_070

Geometric discrepancy: 0.1058

The information below is about IL_8CRE_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82107.5

Basepair signature

cWW-cWW

Number of instances in this motif group

31

Unit IDs

7PZY|1|1|G|1619
7PZY|1|1|G|1620
*
7PZY|1|1|U|1815
7PZY|1|1|U|1816
7PZY|1|1|U|1817
7PZY|1|1|C|1818

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AH

Ribosomal 60S subunit protein L34B

Chain AL

Ribosomal 60S subunit protein L38