IL_7Q0F_080
3D structure
- PDB id
- 7Q0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with phyllanthoside
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.64 Å
Loop
- Sequence
- AGUCGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 7Q0F|1|1|G|2313
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0F_080 not in the Motif Atlas
- Geometric match to IL_4V9F_062
- Geometric discrepancy: 0.0977
- The information below is about IL_4V9F_062
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 11
Unit IDs
7Q0F|1|1|A|1897
7Q0F|1|1|G|1898
7Q0F|1|1|U|1899
7Q0F|1|1|C|1900
7Q0F|1|1|G|1901
7Q0F|1|1|G|1902
*
7Q0F|1|1|C|2311
7Q0F|1|1|U|2312
7Q0F|1|1|G|2313
7Q0F|1|1|U|2314
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 6
- Ribosomal 60S subunit protein L23B
- Chain k
- Ribosomal 60S subunit protein L3
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