IL_7Q0F_133

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

GUA*UC

Length

5 nucleotides

Bulged bases

7Q0F|1|1|U|3306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0F_133 not in the Motif Atlas

Geometric match to IL_3WBM_001

Geometric discrepancy: 0.2545

The information below is about IL_3WBM_001

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.6

Basepair signature

cWW-L-cWW

Number of instances in this motif group

170

Unit IDs

7Q0F|1|1|G|3305
7Q0F|1|1|U|3306
7Q0F|1|1|A|3307
*
7Q0F|1|1|U|3328
7Q0F|1|1|C|3329

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 7

Ribosomal 60S subunit protein L24A