IL_7Q0F_186

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

UUC*GGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0F_186 not in the Motif Atlas

Geometric match to IL_5MWI_005

Geometric discrepancy: 0.2261

The information below is about IL_5MWI_005

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

259

Unit IDs

7Q0F|1|A|U|810
7Q0F|1|A|U|811
7Q0F|1|A|C|812
*
7Q0F|1|A|G|830
7Q0F|1|A|G|831
7Q0F|1|A|A|832

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain M

Ribosomal 40S subunit protein S11A