IL_7Q0P_016

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CUUG*CG

Length

6 nucleotides

Bulged bases

7Q0P|1|1|U|441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0P_016 not in the Motif Atlas

Geometric match to IL_5J7L_324

Geometric discrepancy: 0.214

The information below is about IL_5J7L_324

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_51454.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

45

Unit IDs

7Q0P|1|1|C|439
7Q0P|1|1|U|440
7Q0P|1|1|U|441
7Q0P|1|1|G|442
*
7Q0P|1|1|C|487
7Q0P|1|1|G|488

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AF

Ribosomal 60S subunit protein L32