IL_7Q0P_029

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

AU*AAU

Length

5 nucleotides

Bulged bases

7Q0P|1|1|A|892

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0P_029 not in the Motif Atlas

Homologous match to IL_8C3A_031

Geometric discrepancy: 0.0353

The information below is about IL_8C3A_031

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

127

Unit IDs

7Q0P|1|1|A|824
7Q0P|1|1|U|825
*
7Q0P|1|1|A|891
7Q0P|1|1|A|892
7Q0P|1|1|U|893

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AH

Ribosomal 60S subunit protein L34B

Chain AQ

Ribosomal 60S subunit protein L43A

Chain j

Ribosomal 60S subunit protein L2A