IL_7Q0P_096

3D structure

PDB id

7Q0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Candida albicans 80S ribosome in complex with anisomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GC*GCAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q0P_096 not in the Motif Atlas

Homologous match to IL_8C3A_094

Geometric discrepancy: 0.0641

The information below is about IL_8C3A_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22551.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

9

Unit IDs

7Q0P|1|1|G|2254
7Q0P|1|1|C|2255
*
7Q0P|1|1|G|2285
7Q0P|1|1|C|2286
7Q0P|1|1|A|2287
7Q0P|1|1|U|2288

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AO

60S ribosomal protein L41