IL_7Q0R_197
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0R_197 not in the Motif Atlas
- Geometric match to IL_4V88_435
- Geometric discrepancy: 0.0702
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7Q0R|1|A|G|970
7Q0R|1|A|G|971
7Q0R|1|A|G|972
7Q0R|1|A|A|973
7Q0R|1|A|U|974
7Q0R|1|A|C|975
*
7Q0R|1|A|G|999
7Q0R|1|A|U|1000
7Q0R|1|A|C|1001
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- Ribosomal 40S subunit protein S14B
- Chain b
- 40S ribosomal protein S26
- Chain j
- Ribosomal 60S subunit protein L2A
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