IL_7Q0R_205
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 7Q0R|1|A|C|1143, 7Q0R|1|A|C|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q0R_205 not in the Motif Atlas
- Geometric match to IL_1KOG_007
- Geometric discrepancy: 0.1364
- The information below is about IL_1KOG_007
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.13
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 23
Unit IDs
7Q0R|1|A|A|1142
7Q0R|1|A|C|1143
7Q0R|1|A|C|1144
7Q0R|1|A|A|1145
*
7Q0R|1|A|U|1604
7Q0R|1|A|C|1605
7Q0R|1|A|C|1606
7Q0R|1|A|C|1607
7Q0R|1|A|U|1608
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- Ribosomal 40S subunit protein S5
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain V
- Ribosomal 40S subunit protein S20
- Chain d
- Ribosomal 40S subunit protein S28B
Coloring options: