IL_7Q4K_076

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q4K_076 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2438

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7Q4K|1|BA|C|274
7Q4K|1|BA|C|275
7Q4K|1|BA|U|276
7Q4K|1|BA|G|277
7Q4K|1|BA|A|278
7Q4K|1|BA|A|279
7Q4K|1|BA|U|280
7Q4K|1|BA|C|281
*
7Q4K|1|BA|G|359
7Q4K|1|BA|U|360
7Q4K|1|BA|G|361
7Q4K|1|BA|A|362
7Q4K|1|BA|G|363

Current chains

Chain BA

23S rRNA

Nearby chains