IL_7Q4K_127

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q4K_127 not in the Motif Atlas

Homologous match to IL_5J7L_304

Geometric discrepancy: 0.0664

The information below is about IL_5J7L_304

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.4

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

7Q4K|1|BA|G|1651
7Q4K|1|BA|A|1652
7Q4K|1|BA|G|1653
7Q4K|1|BA|A|1654
7Q4K|1|BA|A|1655
7Q4K|1|BA|C|1656
*
7Q4K|1|BA|G|2004
7Q4K|1|BA|A|2005
7Q4K|1|BA|C|2006

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BD

50S ribosomal protein L3

Chain BN

50S ribosomal protein L17