IL_7Q4K_199

3D structure

PDB id

7Q4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7Q4K|1|BA|U|2132, 7Q4K|1|BA|A|2158

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q4K_199 not in the Motif Atlas

Homologous match to IL_5J7L_330

Geometric discrepancy: 0.3352

The information below is about IL_5J7L_330

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

7Q4K|1|BA|C|2129
7Q4K|1|BA|U|2130
7Q4K|1|BA|U|2131
7Q4K|1|BA|U|2132
7Q4K|1|BA|G|2133
7Q4K|1|BA|A|2134
7Q4K|1|BA|A|2135
7Q4K|1|BA|G|2136
*
7Q4K|1|BA|U|2155
7Q4K|1|BA|G|2156
7Q4K|1|BA|G|2157
7Q4K|1|BA|A|2158
7Q4K|1|BA|G|2159

Current chains

Chain BA

23S rRNA

Nearby chains