IL_7QGN_061

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

CAC*GAAG

Length

7 nucleotides

Bulged bases

7QGN|1|0|A|1493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGN_061 not in the Motif Atlas

Geometric match to IL_8UO6_002

Geometric discrepancy: 0.2762

The information below is about IL_8UO6_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

7QGN|1|0|C|1407
7QGN|1|0|A|1408
7QGN|1|0|C|1409
*
7QGN|1|0|G|1491
7QGN|1|0|A|1492
7QGN|1|0|A|1493
7QGN|1|0|G|1494

Current chains

Chain 0

16S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA

Chain E

30S ribosomal protein S12

Chain N

Large subunit ribosomal RNA; LSU rRNA