IL_7QGN_181

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

7QGN|1|N|U|846, 7QGN|1|N|U|931

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGN_181 not in the Motif Atlas

Homologous match to IL_5J7L_399

Geometric discrepancy: 0.2332

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

7QGN|1|N|A|844
7QGN|1|N|A|845
7QGN|1|N|U|846
7QGN|1|N|U|847
7QGN|1|N|C|848
*
7QGN|1|N|G|930
7QGN|1|N|U|931
7QGN|1|N|U|932
7QGN|1|N|A|933
7QGN|1|N|U|934

Current chains

Chain N

23S rRNA

Nearby chains

Chain m

50S ribosomal protein L30