IL_7QGN_187

3D structure

PDB id

7QGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the SmrB-bound E. coli disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.37 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

7QGN|1|N|U|2132, 7QGN|1|N|G|2133, 7QGN|1|N|A|2171, 7QGN|1|N|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QGN|1|N|G|2124
7QGN|1|N|G|2125
7QGN|1|N|A|2126
7QGN|1|N|G|2127
7QGN|1|N|G|2128
7QGN|1|N|C|2129
7QGN|1|N|U|2130
7QGN|1|N|U|2131
7QGN|1|N|U|2132
7QGN|1|N|G|2133
7QGN|1|N|A|2134
7QGN|1|N|A|2135
7QGN|1|N|G|2136
7QGN|1|N|U|2137
*
7QGN|1|N|A|2154
7QGN|1|N|U|2155
7QGN|1|N|G|2156
7QGN|1|N|G|2157
7QGN|1|N|A|2158
7QGN|1|N|G|2159
7QGN|1|N|C|2160
7QGN|1|N|C|2161
7QGN|1|N|G|2162
7QGN|1|N|A|2163
7QGN|1|N|C|2164
7QGN|1|N|C|2165
7QGN|1|N|U|2166
7QGN|1|N|U|2167
7QGN|1|N|G|2168
7QGN|1|N|A|2169
7QGN|1|N|A|2170
7QGN|1|N|A|2171
7QGN|1|N|U|2172
7QGN|1|N|A|2173
7QGN|1|N|C|2174

Current chains

Chain N

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L1