3D structure

PDB id
7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome at 2.2 A resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
2.21 Å

Loop

Sequence
CUAAACC*GAUGAAAAAUUAUAACCAAG
Length
27 nucleotides
Bulged bases
7QI4|1|A|A|1804, 7QI4|1|A|U|1807
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7QI4|1|A|C|1672
7QI4|1|A|U|1673
7QI4|1|A|A|1674
7QI4|1|A|A|1675
7QI4|1|A|A|1676
7QI4|1|A|C|1677
7QI4|1|A|C|1678
*
7QI4|1|A|G|1797
7QI4|1|A|A|1798
7QI4|1|A|U|1799
7QI4|1|A|G|1800
7QI4|1|A|A|1801
7QI4|1|A|A|1802
7QI4|1|A|A|1803
7QI4|1|A|A|1804
7QI4|1|A|A|1805
7QI4|1|A|U|1806
7QI4|1|A|U|1807
7QI4|1|A|A|1808
7QI4|1|A|U|1809
7QI4|1|A|A|1810
7QI4|1|A|A|1811
7QI4|1|A|C|1812
7QI4|1|A|C|1813
7QI4|1|A|A|1814
7QI4|1|A|A|1815
7QI4|1|A|G|1816

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain V
39S ribosomal protein L24, mitochondrial
Chain Y
39S ribosomal protein L47, mitochondrial
Chain c
39S ribosomal protein L44, mitochondrial
Chain d
39S ribosomal protein L45, mitochondrial
Chain i
39S ribosomal protein L51, mitochondrial

Coloring options:

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