IL_7QI4_072
3D structure
- PDB id
- 7QI4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome at 2.2 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 7QI4|1|AA|A|938
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI4_072 not in the Motif Atlas
- Geometric match to IL_5J7L_026
- Geometric discrepancy: 0.1086
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
7QI4|1|AA|C|935
7QI4|1|AA|G|936
7QI4|1|AA|U|937
7QI4|1|AA|A|938
7QI4|1|AA|A|939
7QI4|1|AA|A|940
7QI4|1|AA|G|941
*
7QI4|1|AA|C|1133
7QI4|1|AA|G|1134
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1
- Chain A3
- Aurora kinase A-interacting protein
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
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