IL_7QI4_077

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QI4_077 not in the Motif Atlas

Geometric match to IL_3WBM_004

Geometric discrepancy: 0.3197

The information below is about IL_3WBM_004

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_18188.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7QI4|1|AA|C|1020
7QI4|1|AA|U|1021
7QI4|1|AA|A|1022
*
7QI4|1|AA|U|1029
7QI4|1|AA|G|1030

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AP

28S ribosomal protein S18c, mitochondrial

Chain AQ

MRPS21 isoform 1