IL_7QI4_083

3D structure

PDB id

7QI4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome at 2.2 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GGU*GC

Length

5 nucleotides

Bulged bases

7QI4|1|AA|G|1179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QI4_083 not in the Motif Atlas

Geometric match to IL_6CZR_148

Geometric discrepancy: 0.3963

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

7QI4|1|AA|G|1178
7QI4|1|AA|G|1179
7QI4|1|AA|U|1180
*
7QI4|1|AA|G|1474
7QI4|1|AA|C|1475

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain Az

mRNA