3D structure

PDB id
7QI5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
Experimental method
ELECTRON MICROSCOPY
Resolution
2.63 Å

Loop

Sequence
AUC*GUGAU
Length
8 nucleotides
Bulged bases
7QI5|1|A|G|3063, 7QI5|1|A|A|3064
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QI5_049 not in the Motif Atlas
Homologous match to IL_7RQB_097
Geometric discrepancy: 0.1445
The information below is about IL_7RQB_097
Detailed Annotation
Isolated non-canonical cWW with bulges
Broad Annotation
Isolated non-canonical cWW with bulges
Motif group
IL_90933.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
11

Unit IDs

7QI5|1|A|A|2997
7QI5|1|A|U|2998
7QI5|1|A|C|2999
*
7QI5|1|A|G|3061
7QI5|1|A|U|3062
7QI5|1|A|G|3063
7QI5|1|A|A|3064
7QI5|1|A|U|3065

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 0
39S ribosomal protein L32, mitochondrial
Chain E
39S ribosomal protein L3, mitochondrial

Coloring options:


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