IL_7QI5_096
3D structure
- PDB id
- 7QI5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A-, P/P- and E/E-tRNAs at 2.63 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- G(B8T)C(5MC)G*CGUAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: B8T, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QI5_096 not in the Motif Atlas
- Homologous match to IL_4LFB_057
- Geometric discrepancy: 0.0647
- The information below is about IL_4LFB_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7QI5|1|AA|G|1485
7QI5|1|AA|B8T|1486
7QI5|1|AA|C|1487
7QI5|1|AA|5MC|1488
7QI5|1|AA|G|1489
*
7QI5|1|AA|C|1561
7QI5|1|AA|G|1562
7QI5|1|AA|U|1563
7QI5|1|AA|A|1564
7QI5|1|AA|A|1565
7QI5|1|AA|C|1566
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain A3
- Aurora kinase A-interacting protein
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain Ax
- Transfer RNA; tRNA
- Chain Az
- mRNA
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