IL_7QI6_058

3D structure

PDB id

7QI6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

AA*UAU

Length

5 nucleotides

Bulged bases

7QI6|1|AA|A|860

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QI6_058 not in the Motif Atlas

Geometric match to IL_5J7L_002

Geometric discrepancy: 0.2584

The information below is about IL_5J7L_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

7QI6|1|AA|A|685
7QI6|1|AA|A|686
*
7QI6|1|AA|U|859
7QI6|1|AA|A|860
7QI6|1|AA|U|861

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AT

28S ribosomal protein S25, mitochondrial