IL_7QP7_014

3D structure

PDB id

7QP7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in closed state (h48S AUG closed)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCUACUU*AUGCCGAC

Length

15 nucleotides

Bulged bases

7QP7|1|A|C|139, 7QP7|1|A|C|142, 7QP7|1|A|U|143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP7|1|A|G|130
7QP7|1|A|C|139
7QP7|1|A|U|140
7QP7|1|A|A|141
7QP7|1|A|C|142
7QP7|1|A|U|143
7QP7|1|A|U|144
*
7QP7|1|A|A|175
7QP7|1|A|U|176
7QP7|1|A|G|177
7QP7|1|A|C|178
7QP7|1|A|C|179
7QP7|1|A|G|180
7QP7|1|A|A|181
7QP7|1|A|C|182

Current chains

Chain A

18S rRNA

Nearby chains

Chain S

40S ribosomal protein S6