IL_7QP7_067

3D structure

PDB id

7QP7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in closed state (h48S AUG closed)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP7|1|A|A|1287
7QP7|1|A|U|1288
7QP7|1|A|U|1289
7QP7|1|A|G|1290
*
7QP7|1|A|C|1309
7QP7|1|A|U|1310
7QP7|1|A|C|1311
7QP7|1|A|G|1312
7QP7|1|A|A|1313
7QP7|1|A|U|1314

Current chains

Chain A

18S rRNA

Nearby chains

Chain a

40S ribosomal protein S10

Chain k

Ubiquitin-40S ribosomal protein S27a

Chain m

40S ribosomal protein S12