IL_7QP7_098

3D structure

PDB id

7QP7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 48S initiation complex in closed state (h48S AUG closed)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CAAUACAG*CCUGUAAUUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QP7|1|A|C|527
7QP7|1|A|A|528
7QP7|1|A|A|529
7QP7|1|A|U|530
7QP7|1|A|A|531
7QP7|1|A|C|532
7QP7|1|A|A|533
7QP7|1|A|G|534
*
7QP7|1|A|C|549
7QP7|1|A|C|550
7QP7|1|A|U|551
7QP7|1|A|G|552
7QP7|1|A|U|553
7QP7|1|A|A|554
7QP7|1|A|A|555
7QP7|1|A|U|556
7QP7|1|A|U|557
7QP7|1|A|G|558

Current chains

Chain A

18S rRNA

Nearby chains

Chain 1

Eukaryotic translation initiation factor 3 subunit B

Chain D

40S ribosomal protein S9

Chain F

40S ribosomal protein S30