IL_7QQ3_015

3D structure

PDB id

7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QQ3_015 not in the Motif Atlas

Homologous match to IL_7RQB_017

Geometric discrepancy: 0.0455

The information below is about IL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7QQ3|1|I|C|672
7QQ3|1|I|C|673
7QQ3|1|I|G|674
*
7QQ3|1|I|C|806
7QQ3|1|I|U|807
7QQ3|1|I|G|808

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L4

Chain T

50S ribosomal protein L15