IL_7QQ3_120

3D structure

PDB id

7QQ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.1 Å

Loop

Sequence

GCCCAGACAG*UCGAGU

Length

16 nucleotides

Bulged bases

7QQ3|1|I|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7QQ3|1|I|G|1042
7QQ3|1|I|C|1043
7QQ3|1|I|C|1044
7QQ3|1|I|C|1045
7QQ3|1|I|A|1046
7QQ3|1|I|G|1047
7QQ3|1|I|A|1048
7QQ3|1|I|C|1049
7QQ3|1|I|A|1050
7QQ3|1|I|G|1051
*
7QQ3|1|I|U|1108
7QQ3|1|I|C|1109
7QQ3|1|I|G|1110
7QQ3|1|I|A|1111
7QQ3|1|I|G|1112
7QQ3|1|I|U|1113

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L6

Chain m

50S ribosomal protein L36