IL_7QV1_036

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACUAG*CGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_036 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.1975

The information below is about IL_5J7L_274

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7QV1|1|V|A|922
7QV1|1|V|C|923
7QV1|1|V|U|924
7QV1|1|V|A|925
7QV1|1|V|G|926
*
7QV1|1|V|C|945
7QV1|1|V|G|946
7QV1|1|V|A|947
7QV1|1|V|A|948
7QV1|1|V|U|949

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16