IL_7QV1_074

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7QV1|1|V|G|1744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_074 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.1192

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

7QV1|1|V|C|1731
7QV1|1|V|G|1732
7QV1|1|V|U|1733
7QV1|1|V|A|1734
7QV1|1|V|A|1735
7QV1|1|V|C|1736
*
7QV1|1|V|G|1741
7QV1|1|V|G|1742
7QV1|1|V|A|1743
7QV1|1|V|G|1744
7QV1|1|V|A|1745
7QV1|1|V|A|1746
7QV1|1|V|G|1747

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA