IL_7QV1_188

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CAAGC*GUGAUG

Length

11 nucleotides

Bulged bases

7QV1|1|V|U|1570

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_188 not in the Motif Atlas

Homologous match to IL_4WF9_116

Geometric discrepancy: 0.295

The information below is about IL_4WF9_116

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_25186.4

Basepair signature

cWW-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7QV1|1|V|C|1515
7QV1|1|V|A|1516
7QV1|1|V|A|1517
7QV1|1|V|G|1518
7QV1|1|V|C|1519
*
7QV1|1|V|G|1566
7QV1|1|V|U|1567
7QV1|1|V|G|1568
7QV1|1|V|A|1569
7QV1|1|V|U|1570
7QV1|1|V|G|1571

Current chains

Chain V

23S ribosomal RNA

Nearby chains