IL_7QV1_197

3D structure

PDB id

7QV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis collided disome (Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGGAG*CGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV1_197 not in the Motif Atlas

Homologous match to IL_9DFE_075

Geometric discrepancy: 0.1948

The information below is about IL_9DFE_075

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

7QV1|1|V|A|1885
7QV1|1|V|G|1886
7QV1|1|V|G|1887
7QV1|1|V|A|1888
7QV1|1|V|G|1889
*
7QV1|1|V|C|1911
7QV1|1|V|G|1912
7QV1|1|V|A|1913
7QV1|1|V|A|1914
7QV1|1|V|U|1915

Current chains

Chain V

23S ribosomal RNA

Nearby chains