IL_7R4X_043

3D structure

PDB id

7R4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.15 Å

Loop

Sequence

GAAAAAA(PSU)(PSU)A*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7R4X|1|2|G|807
7R4X|1|2|A|808
7R4X|1|2|A|809||A
7R4X|1|2|A|810||A
7R4X|1|2|A|811||A
7R4X|1|2|A|812
7R4X|1|2|A|813
7R4X|1|2|PSU|814
7R4X|1|2|PSU|815
7R4X|1|2|A|816
*
7R4X|1|2|U|848
7R4X|1|2|A|849
7R4X|1|2|C|850
7R4X|1|2|C|851
7R4X|1|2|G|852
7R4X|1|2|C|853
7R4X|1|2|A|854
7R4X|1|2|G|855
7R4X|1|2|C|856

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain E

40S ribosomal protein S4, X isoform

Chain J

40S ribosomal protein S9

Chain L

40S ribosomal protein S11

Chain W

40S ribosomal protein S15a