IL_7R7A_021
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- GUUUG*CAUAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7R7A_021 not in the Motif Atlas
- Homologous match to IL_8C3A_024
- Geometric discrepancy: 0.3401
- The information below is about IL_8C3A_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74284.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
7R7A|1|1|G|680
7R7A|1|1|U|681
7R7A|1|1|U|682
7R7A|1|1|U|683
7R7A|1|1|G|684
*
7R7A|1|1|C|696
7R7A|1|1|A|697
7R7A|1|1|U|698
7R7A|1|1|A|699
7R7A|1|1|C|700
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- Ribosome biogenesis protein BRX1
- Chain C
- 60S ribosomal protein L4-A
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain v
- Nucleolar protein 16
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