3D structure

PDB id
7R7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
Experimental method
ELECTRON MICROSCOPY
Resolution
3.04 Å

Loop

Sequence
AUUCUUC*GGAAUAGUU
Length
16 nucleotides
Bulged bases
7R7A|1|1|U|1627, 7R7A|1|1|U|1815, 7R7A|1|1|A|1816
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7R7A|1|1|A|1625
7R7A|1|1|U|1626
7R7A|1|1|U|1627
7R7A|1|1|C|1628
7R7A|1|1|U|1629
7R7A|1|1|U|1630
7R7A|1|1|C|1631
*
7R7A|1|1|G|1811
7R7A|1|1|G|1812
7R7A|1|1|A|1813
7R7A|1|1|A|1814
7R7A|1|1|U|1815
7R7A|1|1|A|1816
7R7A|1|1|G|1817
7R7A|1|1|U|1818
7R7A|1|1|U|1819

Current chains

Chain 1
25S rRNA

Nearby chains

Chain Z
60S ribosomal protein L27-A
Chain m
Ribosome biogenesis protein ERB1
Chain n
Pescadillo homolog
Chain t
Ribosome biogenesis protein RLP7

Coloring options:

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