IL_7R7A_069
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 7R7A|1|1|G|2606
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7R7A_069 not in the Motif Atlas
- Homologous match to IL_8C3A_100
- Geometric discrepancy: 0.2109
- The information below is about IL_8C3A_100
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.10
- Basepair signature
- cWW-cWW-cWW-tHS
- Number of instances in this motif group
- 9
Unit IDs
7R7A|1|1|U|2423
7R7A|1|1|A|2424
7R7A|1|1|G|2425
*
7R7A|1|1|U|2604
7R7A|1|1|G|2605
7R7A|1|1|G|2606
7R7A|1|1|G|2607
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 7
- 60S ribosomal subunit assembly/export protein LOC1
- Chain l
- 60S ribosome subunit biogenesis protein NIP7
- Chain q
- 25S rRNA (cytosine(2870)-C(5))-methyltransferase
Coloring options: