IL_7R7A_077
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CCG*CAGG
- Length
- 7 nucleotides
- Bulged bases
- 7R7A|1|1|A|2971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7R7A_077 not in the Motif Atlas
- Homologous match to IL_8C3A_121
- Geometric discrepancy: 0.4402
- The information below is about IL_8C3A_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
7R7A|1|1|C|2959
7R7A|1|1|C|2960
7R7A|1|1|G|2961
*
7R7A|1|1|C|2970
7R7A|1|1|A|2971
7R7A|1|1|G|2972
7R7A|1|1|G|2973
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain 7
- 60S ribosomal subunit assembly/export protein LOC1
- Chain l
- 60S ribosome subunit biogenesis protein NIP7
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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