IL_7R7A_107
3D structure
- PDB id
- 7R7A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.04 Å
Loop
- Sequence
- CGGGAUAAGGAUUGGCUCUAAGG*CAACUUAG
- Length
- 31 nucleotides
- Bulged bases
- 7R7A|1|1|U|1937, 7R7A|1|1|U|2102, 7R7A|1|1|U|2103
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7R7A|1|1|C|1926
7R7A|1|1|G|1927
7R7A|1|1|G|1928
7R7A|1|1|G|1929
7R7A|1|1|A|1930
7R7A|1|1|U|1931
7R7A|1|1|A|1932
7R7A|1|1|A|1933
7R7A|1|1|G|1934
7R7A|1|1|G|1935
7R7A|1|1|A|1936
7R7A|1|1|U|1937
7R7A|1|1|U|1938
7R7A|1|1|G|1939
7R7A|1|1|G|1940
7R7A|1|1|C|1941
7R7A|1|1|U|1942
7R7A|1|1|C|1943
7R7A|1|1|U|1944
7R7A|1|1|A|1945
7R7A|1|1|A|1946
7R7A|1|1|G|1947
7R7A|1|1|G|1948
*
7R7A|1|1|C|2098
7R7A|1|1|A|2099
7R7A|1|1|A|2100
7R7A|1|1|C|2101
7R7A|1|1|U|2102
7R7A|1|1|U|2103
7R7A|1|1|A|2104
7R7A|1|1|G|2105
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain R
- 60S ribosomal protein L19-A
- Chain m
- Ribosome biogenesis protein ERB1
- Chain p
- YTM1 isoform 1
- Chain x
- ATP-dependent rRNA helicase SPB4
Coloring options: