IL_7R7A_109

3D structure

PDB id

7R7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

CAUA*UAUAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7R7A|1|1|C|2444
7R7A|1|1|A|2445
7R7A|1|1|U|2446
7R7A|1|1|A|2447
*
7R7A|1|1|U|2499
7R7A|1|1|A|2500
7R7A|1|1|U|2501
7R7A|1|1|A|2502
7R7A|1|1|G|2503

Current chains

Chain 1

25S rRNA

Nearby chains

Chain a

Ribosomal protein

Chain q

25S rRNA (cytosine(2870)-C(5))-methyltransferase