IL_7R7A_111

3D structure

PDB id

7R7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model

Experimental method

ELECTRON MICROSCOPY

Resolution

3.04 Å

Loop

Sequence

GUAGAG*CGAUC

Length

11 nucleotides

Bulged bases

7R7A|1|1|U|3341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7R7A|1|1|G|3340
7R7A|1|1|U|3341
7R7A|1|1|A|3342
7R7A|1|1|G|3343
7R7A|1|1|A|3344
7R7A|1|1|G|3345
*
7R7A|1|1|C|3360
7R7A|1|1|G|3361
7R7A|1|1|A|3362
7R7A|1|1|U|3363
7R7A|1|1|C|3364

Current chains

Chain 1

25S rRNA

Nearby chains

Chain u

Ribosome biogenesis protein RLP24

Chain w

27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase

Chain x

ATP-dependent rRNA helicase SPB4