IL_7RQ9_354

3D structure

PDB id

7RQ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGAGCCUGUGAACCC*GGGGGAGGCGCCGGUGAAAUAC

Length

37 nucleotides

Bulged bases

7RQ9|1|2A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQ9|1|2A|G|2124
7RQ9|1|2A|G|2125
7RQ9|1|2A|A|2126
7RQ9|1|2A|G|2127
7RQ9|1|2A|C|2128
7RQ9|1|2A|C|2129
7RQ9|1|2A|U|2130
7RQ9|1|2A|G|2131
7RQ9|1|2A|U|2132
7RQ9|1|2A|G|2133
7RQ9|1|2A|A|2134
7RQ9|1|2A|A|2135
7RQ9|1|2A|C|2136
7RQ9|1|2A|C|2137
7RQ9|1|2A|C|2138
*
7RQ9|1|2A|G|2153
7RQ9|1|2A|G|2154
7RQ9|1|2A|G|2155
7RQ9|1|2A|G|2156
7RQ9|1|2A|G|2157
7RQ9|1|2A|A|2158
7RQ9|1|2A|G|2159
7RQ9|1|2A|G|2160
7RQ9|1|2A|C|2161
7RQ9|1|2A|G|2162
7RQ9|1|2A|C|2163
7RQ9|1|2A|C|2164
7RQ9|1|2A|G|2165
7RQ9|1|2A|G|2166
7RQ9|1|2A|U|2167
7RQ9|1|2A|G|2168
7RQ9|1|2A|A|2169
7RQ9|1|2A|A|2170
7RQ9|1|2A|A|2171
7RQ9|1|2A|U|2172
7RQ9|1|2A|A|2173
7RQ9|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA