IL_7RQC_217

3D structure

PDB id

7RQC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GGA*UUUAAAGAGUGCGUAAUAGCUCAC

Length

27 nucleotides

Bulged bases

7RQC|1|2A|U|1083, 7RQC|1|2A|A|1088, 7RQC|1|2A|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7RQC|1|2A|G|1055
7RQC|1|2A|G|1056
7RQC|1|2A|A|1057
*
7RQC|1|2A|U|1081
7RQC|1|2A|U|1082
7RQC|1|2A|U|1083
7RQC|1|2A|A|1084
7RQC|1|2A|A|1085
7RQC|1|2A|A|1086
7RQC|1|2A|G|1087
7RQC|1|2A|A|1088
7RQC|1|2A|G|1089
7RQC|1|2A|U|1090
7RQC|1|2A|G|1091
7RQC|1|2A|C|1092
7RQC|1|2A|G|1093
7RQC|1|2A|U|1094
7RQC|1|2A|A|1095
7RQC|1|2A|A|1096
7RQC|1|2A|U|1097
7RQC|1|2A|A|1098
7RQC|1|2A|G|1099
7RQC|1|2A|C|1100
7RQC|1|2A|U|1101
7RQC|1|2A|C|1102
7RQC|1|2A|A|1103
7RQC|1|2A|C|1104

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L36

Chain 2H

50S ribosomal protein L6