IL_7RR5_008
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- CUG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_008 not in the Motif Atlas
- Homologous match to IL_8C3A_008
- Geometric discrepancy: 0.0836
- The information below is about IL_8C3A_008
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7RR5|1|C1|C|125
7RR5|1|C1|U|126
7RR5|1|C1|G|127
*
7RR5|1|C1|C|141
7RR5|1|C1|C|142
7RR5|1|C1|G|143
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L8-A
- Chain LN
- 60S ribosomal protein L15-A
- Chain LX
- 60S ribosomal protein L25
- Chain Lh
- 60S ribosomal protein L35-A
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