IL_7RR5_010

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UG*UUUGUA

Length

8 nucleotides

Bulged bases

7RR5|1|C1|U|252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RR5_010 not in the Motif Atlas

Homologous match to IL_5TBW_010

Geometric discrepancy: 0.3062

The information below is about IL_5TBW_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_37379.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

1

Unit IDs

7RR5|1|C1|U|169
7RR5|1|C1|G|170
*
7RR5|1|C1|U|248
7RR5|1|C1|U|249
7RR5|1|C1|U|250
7RR5|1|C1|G|251
7RR5|1|C1|U|252
7RR5|1|C1|A|253

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LG

60S ribosomal protein L8-A

Chain LL

60S ribosomal protein L13

Chain Lh

60S ribosomal protein L35-A