IL_7RR5_014
3D structure
- PDB id
- 7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosomal complex bound with Rbg1/Tma46
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGUAC
- Length
- 18 nucleotides
- Bulged bases
- 7RR5|1|C1|A|398, 7RR5|1|C1|A|402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7RR5_014 not in the Motif Atlas
- Homologous match to IL_5TBW_014
- Geometric discrepancy: 0.1076
- The information below is about IL_5TBW_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60992.7
- Basepair signature
- cWW-cWS-tSH-L-tHH-tWH-cWW-tSS-tSH-L-L
- Number of instances in this motif group
- 6
Unit IDs
7RR5|1|C1|G|376
7RR5|1|C1|A|377
7RR5|1|C1|A|378
7RR5|1|C1|C|379
*
7RR5|1|C1|G|390
7RR5|1|C1|A|391
7RR5|1|C1|G|392
7RR5|1|C1|U|393
7RR5|1|C1|G|394
7RR5|1|C1|A|395
7RR5|1|C1|A|396
7RR5|1|C1|A|397
7RR5|1|C1|A|398
7RR5|1|C1|A|399
7RR5|1|C1|G|400
7RR5|1|C1|U|401
7RR5|1|C1|A|402
7RR5|1|C1|C|403
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain C3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LP
- 60S ribosomal protein L17-A
- Chain LY
- 60S ribosomal protein L26-A
- Chain Ll
- 60S ribosomal protein L39
Coloring options: