3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
CAGACAUGGUGUUUUGUAUUUCACG*CAUAAUG
Length
32 nucleotides
Bulged bases
7RR5|1|C1|A|440
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7RR5|1|C1|C|435
7RR5|1|C1|A|436
7RR5|1|C1|G|437
7RR5|1|C1|A|438
7RR5|1|C1|C|439
7RR5|1|C1|A|440
7RR5|1|C1|U|441
7RR5|1|C1|G|442
7RR5|1|C1|G|443
7RR5|1|C1|U|444
7RR5|1|C1|G|445
7RR5|1|C1|U|446
7RR5|1|C1|U|447
7RR5|1|C1|U|448
7RR5|1|C1|U|449
7RR5|1|C1|G|450
7RR5|1|C1|U|451
7RR5|1|C1|A|485
7RR5|1|C1|U|486
7RR5|1|C1|U|487
7RR5|1|C1|U|488
7RR5|1|C1|C|489
7RR5|1|C1|A|490
7RR5|1|C1|C|491
7RR5|1|C1|G|495
*
7RR5|1|C1|C|618
7RR5|1|C1|A|619
7RR5|1|C1|U|620
7RR5|1|C1|A|621
7RR5|1|C1|A|622
7RR5|1|C1|U|623
7RR5|1|C1|G|624

Current chains

Chain C1
25S rRNA

Nearby chains

Chain LE
60S ribosomal protein L6
Chain LP
60S ribosomal protein L17-A
Chain Le
RPL32 isoform 1
Chain Lf
60S ribosomal protein L33-A

Coloring options:

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