IL_7RR5_045

3D structure

PDB id

7RR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosomal complex bound with Rbg1/Tma46

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UAC*GA

Length

5 nucleotides

Bulged bases

7RR5|1|C1|A|1075

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7RR5_045 not in the Motif Atlas

Homologous match to IL_8C3A_048

Geometric discrepancy: 0.1044

The information below is about IL_8C3A_048

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_00225.5

Basepair signature

cWW-L-cWW

Number of instances in this motif group

47

Unit IDs

7RR5|1|C1|U|1074
7RR5|1|C1|A|1075
7RR5|1|C1|C|1076
*
7RR5|1|C1|G|1083
7RR5|1|C1|A|1084

Current chains

Chain C1

25S rRNA

Nearby chains

Chain LD

RPL5 isoform 1

Chain LT

60S ribosomal protein L21-A

Chain Lb

RPL29 isoform 1