3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
AUU*ACU
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7RR5_046 not in the Motif Atlas
Homologous match to IL_8C3A_049
Geometric discrepancy: 0.0864
The information below is about IL_8C3A_049
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_44258.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
301

Unit IDs

7RR5|1|C1|A|1120
7RR5|1|C1|U|1121
7RR5|1|C1|U|1122
*
7RR5|1|C1|A|1136
7RR5|1|C1|C|1137
7RR5|1|C1|U|1138

Current chains

Chain C1
25S rRNA

Nearby chains

Chain C4
5S ribosomal RNA; 5S rRNA
Chain LF
60S ribosomal protein L7-A
Chain Lb
RPL29 isoform 1

Coloring options:


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