3D structure

PDB id
7RR5 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of ribosomal complex bound with Rbg1/Tma46
Experimental method
ELECTRON MICROSCOPY
Resolution
3.23 Å

Loop

Sequence
GGAUU*AGUUUUC
Length
12 nucleotides
Bulged bases
7RR5|1|C1|U|1820, 7RR5|1|C1|U|1821
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7RR5|1|C1|G|1623
7RR5|1|C1|G|1624
7RR5|1|C1|A|1625
7RR5|1|C1|U|1626
7RR5|1|C1|U|1627
*
7RR5|1|C1|A|1816
7RR5|1|C1|G|1817
7RR5|1|C1|U|1818
7RR5|1|C1|U|1819
7RR5|1|C1|U|1820
7RR5|1|C1|U|1821
7RR5|1|C1|C|1822

Current chains

Chain C1
25S rRNA

Nearby chains

Chain LZ
60S ribosomal protein L27
Chain Lg
60S ribosomal protein L34-A
Chain Lk
RPL38 isoform 1

Coloring options:

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